BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB003F03LP1|AL425149
(849 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig924 1145 0.0
3x_Contig1560 125 2e-28
>3x_Contig924
Length = 2007
Score = 1145 bits (560), Expect = 0.0
Identities = 593/615 (96%)
Strand = Plus / Plus
Query: 3 atttttttaatatataatttttgttcttcatttaaaggtttattttgtttataataattt 62
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1013 atttttttaatatataatttttgttcttcatttaaaggtttattttgtttataataattt 1072
Query: 63 attacatgaataaatttatctaaactattagatttatcagataataaaggatattcttta 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1073 attacatgaataaatttatctaaactattagatttatcagataataaaggatattcttta 1132
Query: 123 aaataatttaaaataaaaatacaattatttaatcctgaaattcataattgtcaattatca 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1133 aaataatttaaaataaaaatacaattatttaatcctgaaattcataattgtcaattatca 1192
Query: 183 tctttagaattagaataaactttaccaatatttttttcactattaatgttatataatgaa 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1193 tctttagaattagaataaactttaccaatatttttttcactattaatgttatataatgaa 1252
Query: 243 ttagtattagatttatcaataaataaatttaaratatgttctaatacatatttattaaca 302
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 1253 ttagtattagatttatcaataaataaatttaaaatatgttctaatacatatttattaaca 1312
Query: 303 atatgtttttgacttaatgcatataavartctaggtgtatttttattatcttttaaagaa 362
|||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||
Sbjct: 1313 atatgtttttgacttaatgcatataaaaatctaggtgtatttttattatcttttaaagaa 1372
Query: 363 atatcaaaacaaccttcagcatcagtaaatccagataatcaataatcatttaaagtaggt 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1373 atatcaaaacaaccttcagcatcagtaaatccagataatcaataatcatttaaagtaggt 1432
Query: 423 aatttacaataattttttaasataattataggttcattattttttmataatttttcattt 482
|||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||
Sbjct: 1433 aatttacaataattttttaaaataattataggttcattattttttaataatttttcattt 1492
Query: 483 aatttagctaaavvrattataaatktaccatatctagtaggtaatactaaattaccatta 542
|||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 1493 aatttagctaaaaaaattataaatttaccatatctagtaggtaatactaaattaccatta 1552
Query: 543 avvrtkaatgntaatsaatgrgtgtctcttcttttatgtactactcatctatatgtkata 602
| | |||| |||| ||| | |||||||||||||||||||||||||||||||| |||
Sbjct: 1553 aaaattaatgataataaataaatatctcttcttttatgtactactcatctatatgttata 1612
Query: 603 tctttktkagattgt 617
||||| | |||||||
Sbjct: 1613 tcttttttagattgt 1627
Score = 346 bits (169), Expect = 6e-95
Identities = 174/177 (98%)
Strand = Plus / Plus
Query: 672 tctttaggagttacaacaacagaaatatcacttctttttattaaaataaatgaaccttta 731
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1682 tctttagaagttacaacaacagaaatatcacttctttttattaaaataaatgaaccttta 1741
Query: 732 ccttcaaaaaatcctacaaatcattctaaaaatttttgatcaggracagaatttataggt 791
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 1742 ccttcaaaaaatcctacaaatcattctaaaaatttttgatcaggaacagaatttataggt 1801
Query: 792 ttaaattctttawattttaaattaaattcatcaaaataaaatttatcttgattaaat 848
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1802 ttaaattctttatattttaaattaaattcatcaaaataaaatttatcttgattaaat 1858
>3x_Contig1560
Length = 9209
Score = 125 bits (61), Expect = 2e-28
Identities = 68/71 (95%)
Strand = Plus / Minus
Query: 247 tattagatttatcaataaataaatttaaratatgttctaatacatatttattaacaatat 306
||||| |||||||||||||||||||||| ||||||||||||||||||||||||| |||||
Sbjct: 2167 tattatatttatcaataaataaatttaaaatatgttctaatacatatttattaataatat 2108
Query: 307 gtttttgactt 317
|||||||||||
Sbjct: 2107 gtttttgactt 2097
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.42 0.717 1.34
Gapped
Lambda K H
1.42 0.717 1.34
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 9788
Number of Sequences: 1807
Number of extensions: 9788
Number of successful extensions: 265
Number of sequences better than 1.0e-20: 2
length of query: 849
length of database: 10,358,551
effective HSP length: 16
effective length of query: 833
effective length of database: 10,329,639
effective search space: 8604589287
effective search space used: 8604589287
T: 0
A: 40
X1: 5 (10.2 bits)
X2: 14 (28.6 bits)
S1: 11 (23.0 bits)
S2: 49 (100.7 bits)